Applying FAIR Principles to Plant Phenotypic Data Management in GnpIS

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Applying FAIR Principles to Plant Phenotypic Data Management in GnpIS

GnpIS is an information repository for plant phenomics that shops entire subject and greenhouse experimental knowledge together with setting measures. It permits long-term entry to datasets following the FAIR ideas: Findable, Accessible, Interoperable, and Reusable, through the use of a versatile and unique strategy. It relies on a generic and ontology pushed knowledge mannequin and […]

Stalk Rot of Sugar Beet Caused by Fusarium solani on the Pacific Coast.

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Stalk Rot of Sugar Beet Caused by Fusarium solani on the Pacific Coast.

In 2006, signs of stalk blight (2) have been noticed on sugar beet (Beta vulgaris L.) vegetation from roots produced in Oregon that have been being grown for seed manufacturing in a greenhouse in Salinas, CA utilizing Salinas Valley soil. Symptoms included vascular and cortical browning, necrosis, and dying of seed stalks. Isolations have been […]

SpaTemHTP: A Data Analysis Pipeline for Efficient Processing and Utilization of Temporal High-Throughput Phenotyping Data

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SpaTemHTP: A Data Analysis Pipeline for Efficient Processing and Utilization of Temporal High-Throughput Phenotyping Data

The speedy improvement of phenotyping applied sciences during the last years gave the chance to check plant improvement over time. The therapy of the large quantity of knowledge collected by high-throughput phenotyping (HTP) platforms is nevertheless an necessary problem for the plant science neighborhood. An necessary challenge is to precisely estimate, over time, the genotypic element of […]

An induced mutation in tomato eIF4E leads to immunity to two potyviruses.

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An induced mutation in tomato eIF4E leads to immunity to two potyviruses.

BACKGROUNDThe characterization of pure recessive resistance genes and Arabidopsis virus-resistant mutants have implicated translation initiation components of the eIF4E and eIF4G households as susceptibility components required for virus an infection and resistance perform.RESULTSTo examine additional the position of translation initiation components in virus resistance we arrange a TILLING platform in tomato, cloned genes encoding for translation initiation components eIF4E and eIF4G and screened for induced mutations that result in virus resistance. A splicing mutant of the eukaryotic translation initiation issue, […]

Functional-structural plant modelling: a new versatile tool in crop science.

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Functional-structural plant modelling: a new versatile tool in crop science.

Plants react to their atmosphere and to administration interventions by adjusting physiological capabilities and construction. Functional-structural plant fashions (FSPM), mix the illustration of three-dimensional (3D) plant construction with chosen physiological capabilities. An FSPM consists of an architectural half (plant construction) and a course of half (plant functioning). The first offers with (i) the varieties of organs which can be initiated and the best way these are related (topology), (ii) co-ordination in organ enlargement dynamics, and (iii) geometrical variables (e.g. leaf angles, leaf curvature). The course of half might embody any physiological or bodily course of that impacts plant progress and growth (e.g. photosynthesis, carbon allocation). […]

Functional-structural plant modelling: a new versatile tool in crop science.

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Functional-structural plant modelling: a new versatile tool in crop science.

Plants react to their atmosphere and to administration interventions by adjusting physiological capabilities and construction. Functional-structural plant fashions (FSPM), mix the illustration of three-dimensional (3D) plant construction with chosen physiological capabilities. An FSPM consists of an architectural half (plant construction) and a course of half (plant functioning). The first offers with (i) the varieties of organs which can be initiated and the best way these are related (topology), (ii) co-ordination in organ enlargement dynamics, and (iii) geometrical variables (e.g. leaf angles, leaf curvature). The course of half might embody any physiological or bodily course of that impacts plant progress and growth (e.g. photosynthesis, carbon allocation). […]